About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11567-
Paelopatides11568ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11569-
Paelopatides11570-
Paelopatides11571-
Paelopatides11572PROTEIN CBG26694
Paelopatides11573PROTEIN CBG26694
Paelopatides11574-
Paelopatides11575UNCHARACTERIZED
Paelopatides11576PROTEIN CBG26694
Paelopatides11577PARANEOPLASTIC ANTIGEN
Paelopatides11579-
Paelopatides11580PROTEIN CBG26694
Paelopatides11581PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides11582RETROTRANSPOSON
Paelopatides11583NETRIN RECEPTOR UNC5
Paelopatides11585ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11586REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11587-
Paelopatides11588ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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