About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11589ENZYMATIC POLYPROTEIN-RELATED
Paelopatides11590POL PROTEIN
Paelopatides11591PROTEIN CBG26694
Paelopatides11592ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides11593PROTEIN CBG26694
Paelopatides11594ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides11595-
Paelopatides11596REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11597-
Paelopatides11598EPM2A-INTERACTING PROTEIN 1
Paelopatides11599POPEYE DOMAIN CONTAINING PROTEIN
Paelopatides11601VITELLOGENIN-RELATED
Paelopatides11602REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11603MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides11604WD REPEAT-CONTAINING PROTEIN 11
Paelopatides11605WD REPEAT-CONTAINING PROTEIN 11
Paelopatides11606ADP-RIBOSYLGLYCOHYDROLASE
Paelopatides11607-
Paelopatides11608ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides11609INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED
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