About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11630ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11631ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11632-
Paelopatides11633PROTEIN CBG26694
Paelopatides11634PLEXIN
Paelopatides11635-
Paelopatides11636SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
Paelopatides11637PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides11638PEPTIDYLPROLYL ISOMERASE
Paelopatides11639ZINC FINGER PROTEIN
Paelopatides11640-
Paelopatides11643-
Paelopatides11644-
Paelopatides11645CYSTINOSIN
Paelopatides11646ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11647THO COMPLEX SUBUNIT 1
Paelopatides11648REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11649ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides11650RNA-BINDING PROTEIN 8A
Paelopatides11651TRANSMEMBRANE PROTEIN 15-RELATED
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