About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11652REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides11654ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides11655PROTEIN CBG26694
Paelopatides11656-
Paelopatides11657HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Paelopatides11658PROTEIN CBG26694
Paelopatides11659PROTEIN CBG26694
Paelopatides11660-
Paelopatides11661-
Paelopatides11662FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides11663FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides11664MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides11665UNCHARACTERIZED
Paelopatides11666-
Paelopatides11667-
Paelopatides11668CYTOCHROME P450 FAMILY 4
Paelopatides11669CYTOCHROME P450 FAMILY 4
Paelopatides11670-
Paelopatides11671AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Paelopatides11672-
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