About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11673MYOSIN
Paelopatides11674GAG-RELATED PROTEIN
Paelopatides11675ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides11676-
Paelopatides11677-
Paelopatides11678FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides11679-
Paelopatides11680RIBOSOME RECYCLING FACTOR
Paelopatides11681PROTEIN CBG26694
Paelopatides11682POL PROTEIN
Paelopatides11683DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Paelopatides11684ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides11685POL PROTEIN
Paelopatides11686TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides11687-
Paelopatides11688-
Paelopatides11689REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11690ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBER
Paelopatides11691ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides11692-
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