About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12065-
Paelopatides12067-
Paelopatides12068-
Paelopatides12069BONUS, ISOFORM C-RELATED
Paelopatides12070-
Paelopatides12071AP ENDONUCLEASE
Paelopatides12072-
Paelopatides12073-
Paelopatides12074CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12075CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12076-
Paelopatides12077ENZYMATIC POLYPROTEIN-RELATED
Paelopatides12078FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides12079FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides12080-
Paelopatides12081-
Paelopatides12082REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12083-
Paelopatides12084NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED
Paelopatides12085MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L51
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