About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12446-
Paelopatides12447-
Paelopatides12448REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12449PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides12450MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
Paelopatides12451REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12452MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
Paelopatides12453-
Paelopatides12454SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides12455SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides12456-
Paelopatides12457-
Paelopatides12458REVERSE TRANSCRIPTASES
Paelopatides12459-
Paelopatides12460-
Paelopatides12461-
Paelopatides12462MYOTUBULARIN-RELATED
Paelopatides12463MYOTUBULARIN-RELATED
Paelopatides12464-
Paelopatides12465CXC DOMAIN-CONTAINING PROTEIN-RELATED
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