About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12466SI:CH211-262H13.3-RELATED-RELATED
Paelopatides12467-
Paelopatides12468ENDONUCLEASE
Paelopatides12469RETROTRANSPOSON
Paelopatides12470-
Paelopatides12471ENDONUCLEASE-RELATED
Paelopatides12472PROPERDIN
Paelopatides12473CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12474CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides12475PROTEIN CBG26694
Paelopatides12476ENDONUCLEASE-RELATED
Paelopatides12477ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides12478RETROTRANSPOSON
Paelopatides12479RETROTRANSPOSON
Paelopatides12480RETROTRANSPOSON
Paelopatides12481PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides12482ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides12483ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides12484PROTEIN CBG26694
Paelopatides12485PROTEIN CBG26694
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