About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13100ORGANIC ANION TRANSPORTER
Paelopatides13101-
Paelopatides13102ORGANIC ANION TRANSPORTER
Paelopatides13103EXPRESSED PROTEIN
Paelopatides13104EXPRESSED PROTEIN
Paelopatides13105ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides13106-
Paelopatides13107ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
Paelopatides13110-
Paelopatides13111-
Paelopatides13113-
Paelopatides13114SYNTAXIN
Paelopatides13115-
Paelopatides13116-
Paelopatides13117BARRIER TO AUTOINTEGRATION FACTOR 2
Paelopatides13118ENDONUCLEASE
Paelopatides13119-
Paelopatides13120PROTEIN CBG26694
Paelopatides13121CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
Paelopatides13122-
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