About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13165KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Paelopatides13166-
Paelopatides13167REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13168SPERM SPECIFIC ANTIGEN 2-RELATED
Paelopatides13169-
Paelopatides13170-
Paelopatides13171-
Paelopatides13172CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides13173-
Paelopatides13174CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED
Paelopatides13175TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides13176-
Paelopatides13177-
Paelopatides13178DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides13179-
Paelopatides13180EXS-RELATED PROTEIN
Paelopatides13181BONUS, ISOFORM C-RELATED
Paelopatides13182ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN
Paelopatides13183-
Paelopatides13184GEO09665P1-RELATED
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