About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13227ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides13228-
Paelopatides13229ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides13230REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides13232RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides13233-
Paelopatides13234-
Paelopatides13236PROTEIN CBG26694
Paelopatides13237ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides13238TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides13239TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides13240BUCENTAUR RELATED
Paelopatides13241SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides13242-
Paelopatides13243-
Paelopatides13244-
Paelopatides13245FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides13246-
Paelopatides13247TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides13248-
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