About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13207-
Paelopatides13208-
Paelopatides13209DNA HELICASE RECQ FAMILY MEMBER
Paelopatides13210-
Paelopatides13211FATTY ACID SYNTHASE
Paelopatides13212ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides13213INTEGRATOR COMPLEX SUBUNIT 5
Paelopatides13214PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides13215SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides13216SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides13217DTDP-4-DEHYDRORHAMNOSE REDUCTASE
Paelopatides13218EPM2A-INTERACTING PROTEIN 1
Paelopatides13219EPM2A-INTERACTING PROTEIN 1
Paelopatides13220FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides13221FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides13222FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides13223-
Paelopatides13224PROTEIN CBG26694
Paelopatides13225PROTEIN CBG26694
Paelopatides13226PROTEIN ZBED8-RELATED
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