About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13443-
Paelopatides13444ZGC:195170
Paelopatides13445-
Paelopatides13446OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides13447-
Paelopatides13448ALDEHYDE DEHYDROGENASE-RELATED
Paelopatides13449-
Paelopatides13450-
Paelopatides13451ALDEHYDE DEHYDROGENASE-RELATED
Paelopatides13452REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13453ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides13454-
Paelopatides13455PELOTA
Paelopatides13456ATP-BINDING CASSETTE SUB-FAMILY B
Paelopatides13457MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
Paelopatides13458HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides13459-
Paelopatides13460DI-N-ACETYLCHITOBIASE
Paelopatides13461-
Paelopatides13462FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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