About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13339FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides13340FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides13341PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides13342-
Paelopatides13343-
Paelopatides13344REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13345XK-RELATED PROTEIN
Paelopatides13346TYROSINASE FAMILY MEMBER
Paelopatides13347-
Paelopatides13348MALE-ENHANCED ANTIGEN-1
Paelopatides13349-
Paelopatides13350-
Paelopatides13351LATERAL SIGNALING TARGET PROTEIN 2 HOMOLOG
Paelopatides13352ACYL-COA DEHYDROGENASE
Paelopatides13353POL PROTEIN
Paelopatides13354PROTEIN CBG26694
Paelopatides13355ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides13356-
Paelopatides13357PROTEIN CBG26694
Paelopatides13358-
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