About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides13545REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides13546ANION EXCHANGE PROTEIN
Paelopatides13547ANION EXCHANGE PROTEIN
Paelopatides13548ANION EXCHANGE PROTEIN
Paelopatides13549-
Paelopatides13550PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides13551TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides13552PROTEIN CBG26694
Paelopatides13553TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides13554PARANEOPLASTIC ANTIGEN
Paelopatides13555PROTEIN CBG26694
Paelopatides13556ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides13558-
Paelopatides13559PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides13560PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides13561PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides13562-
Paelopatides13563-
Paelopatides13564PROTEIN CBG26694
Paelopatides13565PROTEIN CBG26694
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