About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14310B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides14311TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides14312MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides14313-
Paelopatides14314ENDONUCLEASE
Paelopatides14316REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14317INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides14318-
Paelopatides14319ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides14320-
Paelopatides14321ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides14322PROTEIN CBG26694
Paelopatides14323HISTONE ACETYLTRANSFERASE
Paelopatides14324-
Paelopatides14325-
Paelopatides14326CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 299
Paelopatides14327ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14328-
Paelopatides14329THAP DOMAIN-CONTAINING PROTEIN 6
Paelopatides14330REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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