About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14289-
Paelopatides14290-
Paelopatides14291GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Paelopatides14292PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides14294IKB KINASE
Paelopatides14295IKB KINASE
Paelopatides14296ENDONUCLEASE-RELATED
Paelopatides14297ASPARTYL PROTEASE DDI-RELATED
Paelopatides14298-
Paelopatides14299-
Paelopatides14300-
Paelopatides14301ZGC:195170
Paelopatides14302PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides14303MULTICOPPER OXIDASE-RELATED
Paelopatides14304-
Paelopatides14305-
Paelopatides14306-
Paelopatides14307PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides14308RETROTRANSPOSON
Paelopatides14309RETROTRANSPOSON
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