About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14331-
Paelopatides14332-
Paelopatides14333ZGC:195170
Paelopatides14334PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides14336PROTEIN CBG26694
Paelopatides14337GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides14338-
Paelopatides14339-
Paelopatides14340-
Paelopatides14341TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides14342GAG-RELATED PROTEIN
Paelopatides14343-
Paelopatides14344OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides14345PROTEIN FLATTOP
Paelopatides14346CST COMPLEX SUBUNIT TEN1
Paelopatides14347BONE MARROW PROTEOGLYCAN
Paelopatides14348TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides14349-
Paelopatides14350PROTEIN CBG26694
Paelopatides14351REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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