About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14926REVERSE TRANSCRIPTASES
Paelopatides14927GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides14928GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides14929GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides14930INTEGRATOR COMPLEX SUBUNIT 9
Paelopatides14931ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides14932-
Paelopatides14933PROTEIN CBG24663
Paelopatides14934REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14935GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides14936PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides14937RETROTRANSPOSON
Paelopatides14938RETROTRANSPOSON
Paelopatides14939COLORECTAL MUTANT CANCER PROTEIN MCC PROTEIN -RELATED
Paelopatides14940-
Paelopatides14941SI:CH211-196P9.1-RELATED
Paelopatides14942IP13529P
Paelopatides14943SI:CH211-196P9.1-RELATED
Paelopatides14945-
Paelopatides14946-
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