About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14947LIPOXYGENASE
Paelopatides14948BUCENTAUR RELATED
Paelopatides14949REVERSE TRANSCRIPTASES
Paelopatides14950-
Paelopatides14951ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides14952REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14953COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides14954-
Paelopatides14955EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT
Paelopatides14956ATP-DEPENDENT DNA HELICASE
Paelopatides14957ATP-DEPENDENT DNA HELICASE
Paelopatides14959-
Paelopatides14960-
Paelopatides14961-
Paelopatides14962-
Paelopatides14963-
Paelopatides149644.1 G PROTEIN
Paelopatides149654.1 G PROTEIN
Paelopatides149664.1 G PROTEIN
Paelopatides14967NEBULIN
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