About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14988ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14989UNCHARACTERIZED
Paelopatides14990PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides14991-
Paelopatides14992MACROGLOBULIN / COMPLEMENT
Paelopatides14993ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides14994REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14995REVERSE TRANSCRIPTASES
Paelopatides14996-
Paelopatides14997-
Paelopatides14998DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER
Paelopatides14999EPM2A-INTERACTING PROTEIN 1
Paelopatides15000EPM2A-INTERACTING PROTEIN 1
Paelopatides15001L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides15002VINCULIN
Paelopatides15003VINCULIN
Paelopatides15004-
Paelopatides1500552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides15006-
Paelopatides15007DIHYDROANTICAPSIN 7-DEHYDROGENASE
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