About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14968NEBULIN
Paelopatides149694.1 G PROTEIN
Paelopatides14970CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides14971SULFOTRANSFERASE SULT
Paelopatides14972POL PROTEIN
Paelopatides14973-
Paelopatides14974HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides14975ZGC:195170
Paelopatides14976SI:CH211-108C17.2-RELATED-RELATED
Paelopatides14977CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides14978CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides14979-
Paelopatides14980-
Paelopatides14981-
Paelopatides14982ACROSIN-RELATED
Paelopatides14983PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides14984HYDROGENASE MATURATION FACTOR HOXX
Paelopatides14985MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides14986-
Paelopatides14987CENTROSOMAL PROTEIN 2
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