About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15051-
Paelopatides15052-
Paelopatides15053REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15054PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides15055-
Paelopatides15056-
Paelopatides15057PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides15058-
Paelopatides15059ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides15060-
Paelopatides15061GAG-RELATED PROTEIN
Paelopatides15062FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides15063RETROTRANSPOSON
Paelopatides15064RETROTRANSPOSON
Paelopatides15065-
Paelopatides15066NETRIN RECEPTOR UNC5
Paelopatides15067-
Paelopatides15068-
Paelopatides15069PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides15071BUCENTAUR RELATED
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