About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15336INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED
Paelopatides15337C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides15338-
Paelopatides15339MUCOLIPIN
Paelopatides15340MUCOLIPIN
Paelopatides15341REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15342LUNG ADENOMA SUSCEPTIBILITY 1-RELATED
Paelopatides15343GROWTH HORMONE-INDUCIBLE SOLUBLE PROTEIN-RELATED
Paelopatides15344UPF0705 PROTEIN C11ORF49
Paelopatides15345EXODEOXYRIBONUCLEASE III
Paelopatides15346REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15347SERUM AMYLOID A
Paelopatides15348CYSTEINYL-TRNA SYNTHETASE
Paelopatides15349-
Paelopatides15350-
Paelopatides15351-
Paelopatides15352-
Paelopatides15353-
Paelopatides15354-
Paelopatides15357PROTEIN CBG26694
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