About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15358PARANEOPLASTIC ANTIGEN
Paelopatides15359G-PROTEIN COUPLED RECEPTOR
Paelopatides15360G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides15361-
Paelopatides15362-
Paelopatides15363ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides15364EXPRESSED PROTEIN
Paelopatides15365MEF2B PROTEIN
Paelopatides15366-
Paelopatides15367L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides15368IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides15369ALKALINE CERAMIDASE
Paelopatides15370ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides15371L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides15373PROTEIN CBG26694
Paelopatides15374-
Paelopatides15375TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides15376ENZYMATIC POLYPROTEIN-RELATED
Paelopatides15377-
Paelopatides15378REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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