About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides15442PROTEIN CBG10425
Paelopatides15443-
Paelopatides15444ENDONUCLEASE
Paelopatides15445-
Paelopatides15446REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides15447-
Paelopatides15448-
Paelopatides15449-
Paelopatides15450INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
Paelopatides15451COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides15452-
Paelopatides15453POL PROTEIN
Paelopatides15454ENDONUCLEASE-RELATED
Paelopatides15455-
Paelopatides15456PHOSPHOLIPID SCRAMBLASE-RELATED
Paelopatides15457-
Paelopatides15458NEUROPEPTIDE Y RECEPTOR
Paelopatides15459-
Paelopatides15460FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides15461-
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