About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16062FATTY ACID BINDING PROTEIN
Paelopatides16063ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides16066-
Paelopatides16067PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides16068-
Paelopatides16069CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16070KINESIN-ASSOCIATED PROTEINS
Paelopatides16071-
Paelopatides16072GAG-RELATED PROTEIN
Paelopatides16073-
Paelopatides16074MONOCARBOXYLATE TRANSPORTER
Paelopatides16075TRANSMEMBRANE PROTEIN 79
Paelopatides16076PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides16077ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides16078ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides16079-
Paelopatides16080-
Paelopatides16081PROTEIN CBG26694
Paelopatides16082-
Paelopatides16083-
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