About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16084FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides16085ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16086-
Paelopatides16087ZGC:195170
Paelopatides16088SI:CH211-108C17.2-RELATED-RELATED
Paelopatides16089BONUS, ISOFORM C-RELATED
Paelopatides16090ENZYMATIC POLYPROTEIN-RELATED
Paelopatides16091-
Paelopatides16092ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16093ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16094BUCENTAUR RELATED
Paelopatides16095PROTEIN CBG26694
Paelopatides16096PROTEIN CBG26694
Paelopatides16097CAPPUCCINO
Paelopatides16098GBP PROTEIN
Paelopatides16099CYSTEINE PROTEASE FAMILY C1-RELATED
Paelopatides16100MATRIX METALLOPROTEINASE
Paelopatides16101PARANEOPLASTIC ANTIGEN
Paelopatides16102-
Paelopatides16103POL PROTEIN
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