About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17164-
Paelopatides17165UNCHARACTERIZED
Paelopatides17166GTP-BINDING
Paelopatides17167-
Paelopatides17168ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides17169PROTEIN CBG26694
Paelopatides17170MALE FERTILITY FACTOR KL5
Paelopatides17171MALE FERTILITY FACTOR KL5
Paelopatides17172-
Paelopatides17173-
Paelopatides17174-
Paelopatides17176-
Paelopatides17177-
Paelopatides17178PROTEIN CBG26694
Paelopatides17179CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Paelopatides17180ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Paelopatides17181ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Paelopatides17182PROTEIN CBG26694
Paelopatides17183-
Paelopatides17184REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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