About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17020ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides17021-
Paelopatides17022PROTEIN CBG26694
Paelopatides17023-
Paelopatides17024TRANSPOSABLE ELEMENT-RELATED
Paelopatides17025SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides17026OXYSTEROL-BINDING PROTEIN-RELATED
Paelopatides17027ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides17028POS9-ACTIVATING FACTOR FAP7-RELATED
Paelopatides17029PROTEIN CBG26694
Paelopatides17030DNA POLYMERASE ETA
Paelopatides17031SLEI FAMILY PROTEIN
Paelopatides17032-
Paelopatides17033-
Paelopatides17034-
Paelopatides17035REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17036-
Paelopatides17037-
Paelopatides17038-
Paelopatides17039-
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