About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17205COATOMER SUBUNIT EPSILON
Paelopatides17206-
Paelopatides17208CYCLINS
Paelopatides17209RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides17210SI:CH211-196P9.1-RELATED
Paelopatides17211DOUBLECORTIN DOMAIN CONTAINING 2
Paelopatides17212-
Paelopatides17213ENDONUCLEASE-RELATED
Paelopatides17214ENZYMATIC POLYPROTEIN-RELATED
Paelopatides17215TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides17216PARANEOPLASTIC ANTIGEN
Paelopatides17217-
Paelopatides17218HOMEODOX-CONTAINING PROTEIN 1 HMBOX1
Paelopatides17219-
Paelopatides17220PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Paelopatides17221REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17222REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17223PROTEIN CBG26694
Paelopatides17224-
Paelopatides17225-
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