About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17040-
Paelopatides17041REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17042PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides17043ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides17044-
Paelopatides17045-
Paelopatides17046-
Paelopatides17047LP04239P
Paelopatides17048-
Paelopatides17049-
Paelopatides17050LP04239P
Paelopatides17051WNT RELATED
Paelopatides17052HYALURONAN MEDIATED MOTILITY RECEPTOR
Paelopatides17053-
Paelopatides17054-
Paelopatides17055FI04643P-RELATED
Paelopatides17056IFT140/172-RELATED
Paelopatides17057CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides17058TRANSPOSABLE ELEMENT-RELATED
Paelopatides17059-
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