About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17648PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides17649-
Paelopatides17650-
Paelopatides17651-
Paelopatides17652-
Paelopatides17653REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17654-
Paelopatides17655COILED-COIL DOMAIN-CONTAINING PROTEIN 30
Paelopatides17656ATP-DEPENDENT RNA HELICASE
Paelopatides17659-
Paelopatides17660INNER CENTROMERE PROTEIN
Paelopatides17661IP13529P
Paelopatides17662SI:CH211-196P9.1-RELATED
Paelopatides17663IP13529P
Paelopatides17664SPERMATID WD-REPEAT PROTEIN
Paelopatides17666KERATIN ASSOCIATED PROTEIN
Paelopatides17667-
Paelopatides17668-
Paelopatides17669PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides17670-
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