About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17671-
Paelopatides17672-
Paelopatides17673RRNA METHYLTRANSFERASE 3,
Paelopatides17674REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17675-
Paelopatides17676-
Paelopatides17677THO COMPLEX SUBUNIT 6 HOMOLOG
Paelopatides17678ACYL-COA DEHYDROGENASE
Paelopatides17679RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Paelopatides17680OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides17681-
Paelopatides17682PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides17683-
Paelopatides17684-
Paelopatides17685-
Paelopatides17686REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17687L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides17688ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides17689-
Paelopatides17690TRANSPOSON
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