About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17985ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides17986PROTEIN CBG26694
Paelopatides17987-
Paelopatides17988-
Paelopatides17989-
Paelopatides17990ZINC FINGER-CONTAINING
Paelopatides17991-
Paelopatides17992ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides17993RETROTRANSPOSON
Paelopatides17994RETROTRANSPOSON
Paelopatides17995PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides17996PROTEIN CBG26694
Paelopatides17997PROTEIN CBG26694
Paelopatides17998PROTEIN CBG26694
Paelopatides17999-
Paelopatides18000RING BOX
Paelopatides18001-
Paelopatides18002-
Paelopatides18003AMINO ACID TRANSPORTER
Paelopatides18004AMINO ACID TRANSPORTER
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