About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17965-
Paelopatides17966-
Paelopatides17967REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17968REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17969GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides17970-
Paelopatides17971ZGC:195170
Paelopatides17972DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides17973ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides17974PROTEIN CBG26694
Paelopatides17975UNCHARACTERIZED
Paelopatides17976S-ANTIGEN PROTEIN
Paelopatides17977UNCHARACTERIZED
Paelopatides17978REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17979REVERSE TRANSCRIPTASES
Paelopatides17980REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17981PROTEIN CBG26694
Paelopatides17982ACROSIN-RELATED
Paelopatides17983-
Paelopatides17984PROTEIN CBG26694
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