About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18230PHOSPHATE TRANSPORTER
Paelopatides18231REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18232UNCHARACTERIZED
Paelopatides18233REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18234EPM2A-INTERACTING PROTEIN 1
Paelopatides18235EPM2A-INTERACTING PROTEIN 1
Paelopatides18236HISTIDINE TRIAD HIT PROTEIN MEMBER
Paelopatides18237-
Paelopatides18238LYMPHOCYTE EXPANSION MOLECULE
Paelopatides18239-
Paelopatides18240SAD1/UNC-84-LIKE PROTEIN-RELATED
Paelopatides18241RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER
Paelopatides18242TRANSPOSON
Paelopatides18243-
Paelopatides18250SI:CH211-196P9.1-RELATED
Paelopatides18253-
Paelopatides18254-
Paelopatides18255AGAP004733-PA
Paelopatides18256TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED
Paelopatides18257PROTEIN CBG26694
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