About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18471-
Paelopatides18472CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides18473-
Paelopatides18475GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE
Paelopatides18478GAG-RELATED PROTEIN
Paelopatides18479-
Paelopatides18480-
Paelopatides18481NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides18482-
Paelopatides18483-
Paelopatides18484-
Paelopatides18485TRANSPOSABLE ELEMENT-RELATED
Paelopatides18486-
Paelopatides18487PROTEIN CBG26694
Paelopatides18488PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides18489L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides18490ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides18491ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides18492-
Paelopatides18493SI:CH211-108C17.2-RELATED-RELATED
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