About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18514-
Paelopatides18515-
Paelopatides18516RETROTRANSPOSON
Paelopatides18517PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides18518PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides18519-
Paelopatides18520MULTIPLE MYELOMA TUMOR-ASSOCIATED PROTEIN 2 FAMILY MEMBER
Paelopatides18521DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides18522ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides18523PROTEIN CBG26694
Paelopatides18524RABCONNECTIN-3B, ISOFORM A
Paelopatides18525RETROTRANSPOSON
Paelopatides18526RETROTRANSPOSON
Paelopatides18527DNA HELICASE RECQ FAMILY MEMBER
Paelopatides18528SI:CH211-108C17.2-RELATED-RELATED
Paelopatides18529REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18530AFADIN
Paelopatides18531-
Paelopatides18532AFADIN
Paelopatides18533DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED
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