About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18775PROTEIN CBG26694
Paelopatides18776FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides18777-
Paelopatides18780-
Paelopatides1878152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides18782GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Paelopatides18783SERINE/THREONINE-PROTEIN KINASE
Paelopatides18784-
Paelopatides18785TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides18786ENZYMATIC POLYPROTEIN-RELATED
Paelopatides18787ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides18788BONUS, ISOFORM C-RELATED
Paelopatides18789BONUS, ISOFORM C-RELATED
Paelopatides18790-
Paelopatides18791-
Paelopatides18792RETROTRANSPOSON
Paelopatides18793SUGAR KINASE
Paelopatides18795PARANEOPLASTIC ANTIGEN
Paelopatides18796-
Paelopatides18797PROTEIN CBG26694
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