About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18888-
Paelopatides18889REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18890DNA HELICASE RECQ FAMILY MEMBER
Paelopatides18891-
Paelopatides18892-
Paelopatides18893HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
Paelopatides18894E3 UBIQUITIN-PROTEIN LIGASE ZNRF1-LIKE PROTEIN
Paelopatides18895GUANYLYL CYCLASE DOMAIN CONTAINING PROTEIN 1 GUCD1
Paelopatides18896NUDIX HYDROLASE RELATED
Paelopatides18897NUDIX HYDROLASE
Paelopatides18898ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides18899NUDIX HYDROLASE
Paelopatides18900EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides18901REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18902REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18903-
Paelopatides18904ATP-DEPENDENT RNA HELICASE
Paelopatides18905WNT RELATED
Paelopatides18906TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides18907HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
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