About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18908-
Paelopatides18909POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides18910HYDROGENASE MATURATION FACTOR HOXX
Paelopatides18911TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides18912REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18913EGALITARIAN, ISOFORM B
Paelopatides18914-
Paelopatides18916-
Paelopatides18917RETROTRANSPOSON
Paelopatides18918PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides18919-
Paelopatides18920-
Paelopatides18921-
Paelopatides18922IP13529P
Paelopatides18923-
Paelopatides18924THAP DOMAIN PROTEIN
Paelopatides18925FI04643P-RELATED
Paelopatides18926-
Paelopatides18927-
Paelopatides18928-
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