About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19327-
Paelopatides19328-
Paelopatides19329-
Paelopatides19330ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides19331PROTEIN CBG26694
Paelopatides19332DISRUPTED IN SCHIZOPHRENIA 1 PROTEIN
Paelopatides19333PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides19334SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Paelopatides19335SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Paelopatides19336SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54
Paelopatides19337SERINE HYDROLASE RBBP9
Paelopatides19338-
Paelopatides19339-
Paelopatides19340-
Paelopatides19341-
Paelopatides19342POL PROTEIN
Paelopatides19343CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides19344REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19345EPM2A-INTERACTING PROTEIN 1
Paelopatides19346REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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