About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19367REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19368-
Paelopatides19369-
Paelopatides19370PROTEIN CBG26694
Paelopatides19371-
Paelopatides19372ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides19373ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1
Paelopatides19374VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
Paelopatides1937530S RIBOSOMAL PROTEIN S14
Paelopatides19376BONUS, ISOFORM C-RELATED
Paelopatides19377N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides19378-
Paelopatides19379POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1
Paelopatides19380ENDONUCLEASE
Paelopatides19381-
Paelopatides19382NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED
Paelopatides19383TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER
Paelopatides19384REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19385TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER
Paelopatides19386REQUIRED FOR EXCISION 1-B DOMAIN-CONTAINING PROTEIN
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