About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19387ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN
Paelopatides19388UNCHARACTERIZED
Paelopatides19389-
Paelopatides19390-
Paelopatides19391-
Paelopatides19392NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides19393AP ENDONUCLEASE
Paelopatides19394PROTEIN CBG26694
Paelopatides19395ATP-DEPENDENT DNA HELICASE
Paelopatides19396REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19397-
Paelopatides19398-
Paelopatides19399SODIUM-BILE ACID COTRANSPORTER
Paelopatides19400-
Paelopatides19401ENDONUCLEASE-RELATED
Paelopatides19402POL PROTEIN
Paelopatides19403PARANEOPLASTIC ANTIGEN
Paelopatides19404-
Paelopatides19405PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
Paelopatides19406REVERSE TRANSCRIPTASES
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