About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19451MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Paelopatides19454PROTEIN CBG26694
Paelopatides19455DNAJ HOMOLOG SUBFAMILY C MEMBER 2
Paelopatides19456RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides19457DNA HELICASE RECQ FAMILY MEMBER
Paelopatides19458F-BOX ONLY PROTEIN 48-RELATED
Paelopatides19459-
Paelopatides19460-
Paelopatides19461LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Paelopatides19462ZINC FINGER MATRIN-TYPE PROTEIN 3
Paelopatides19463-
Paelopatides19464GAG-RELATED PROTEIN
Paelopatides19465GAG-RELATED PROTEIN
Paelopatides19466FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides19467FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides19468-
Paelopatides19469PROTEIN CBG26694
Paelopatides19470PROTEIN CBG26694
Paelopatides19471INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides19472ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
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