About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19771PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides19772TRANSPOSON
Paelopatides19773EXPORTED SERINE/THREONINE PROTEIN KINASE
Paelopatides19774ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides19775ZINC FINGER PROTEIN
Paelopatides19776-
Paelopatides19777-
Paelopatides19778-
Paelopatides19779TUBULIN
Paelopatides19780-
Paelopatides19782UBIQUITIN-PROTEIN LIGASE E3C
Paelopatides19783-
Paelopatides19784-
Paelopatides19785CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides19786CHYMOTRYPSIN-RELATED
Paelopatides19787ACROSIN-RELATED
Paelopatides19788-
Paelopatides19789-
Paelopatides19791IP13529P
Paelopatides19792SULFOTRANSFERASE SULT
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