About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20515-
Paelopatides20516GAG-RELATED PROTEIN
Paelopatides20517GLYCOPROTEIN HORMONE BETA CHAIN
Paelopatides20518TRANSPOSON
Paelopatides20519POL PROTEIN
Paelopatides20520-
Paelopatides20521GLYCOPROTEIN HORMONE ALPHA-2
Paelopatides20522-
Paelopatides20523-
Paelopatides20524TRANSPOSON
Paelopatides2052652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides20527PROTEIN CBG26694
Paelopatides20528ENZYMATIC POLYPROTEIN-RELATED
Paelopatides20529-
Paelopatides20530ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides20541-
Paelopatides20542T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
Paelopatides20543PROTEIN CBG26694
Paelopatides20544ENDONUCLEASE-RELATED
Paelopatides20545FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
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