About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20387REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20388RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides20389G-PROTEIN COUPLED RECEPTOR
Paelopatides20390PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides20391ENZYMATIC POLYPROTEIN-RELATED
Paelopatides20392PROTEIN CBG26694
Paelopatides20393PARANEOPLASTIC ANTIGEN
Paelopatides20394ENDONUCLEASE
Paelopatides20395-
Paelopatides20396PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides20397HEXAMETHYLENE BISACETAMIDE INDUCIBLE 1
Paelopatides20398PCD6 INTERACTING PROTEIN-RELATED
Paelopatides20399-
Paelopatides20400RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides20401-
Paelopatides20402RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1
Paelopatides20403L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides20404-
Paelopatides20405RETROTRANSPOSON
Paelopatides20406PHD-TYPE DOMAIN-CONTAINING PROTEIN
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