About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20451OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides20452PROTEIN CBG26694
Paelopatides20453F-BOX ONLY PROTEIN 6-LIKE PROTEIN
Paelopatides20454F-BOX ONLY PROTEIN 6-LIKE PROTEIN
Paelopatides20455-
Paelopatides20456PROTEIN CBG26694
Paelopatides20457-
Paelopatides20458PROTEIN CBG26694
Paelopatides20459PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides20460TESTIS-SPECIFIC Y-ENCODED PROTEIN
Paelopatides20461-
Paelopatides20462-
Paelopatides20463UPF0428 PROTEIN CXORF56
Paelopatides20466-
Paelopatides20467POL PROTEIN
Paelopatides20468ENDONUCLEASE-RELATED
Paelopatides20469GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides2047052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides20471PROTEIN CBG26694
Paelopatides20472ENZYMATIC POLYPROTEIN-RELATED
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